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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015912184.1_cds_XP_016462208.1_55459
CDS Infomation

[gene=LOC107785416] [db_xref=GeneID:107785416] [protein=protein NRT1/ PTR FAMILY 5.10-like] [protein_id=XP_016462208.1] [location=complement(join(31921..32737,33130..33665,33844..34061,35258..35393))] [gbkey=CDS]
Sequence

ATGGCCACCGGAGTCAACATCTCCGACGCCGAAACCCCCTTTCTCGGCGACGTCGTTGAA
GGTTCAGTTGACTTCAAGGGTCGTCCTGTGACCCGATCCAAATCCGGTGGCTGGAGATCC
GCTTCCTTCATCATAGGCGTGGAGGTTGCAGAGAGATTTGCATATTATGGGATAAGTTCG
AACCTAATAAGCTACCTAACGGGCCCACTAGGCCAATCGGTTGCAACAGCAGCGGTGAAT
GTAAATGCTTGGAGCGGAACAGCATCGCTTCTTCCGCTTTTGGGCGCATTTATCGCTGAT
TCATACCTGGGTCGGTATCGGACCATTATCATCTCCTCTCTACTCTACATCCTGGGACTT
GGCTTCTTGACGCTTTCAACTGTCCTCCCTCTCAATTATTCTGACTGCCAAGATACTGCA
ACATGTTCTCCTCCCAAGCTCCAAATTATTTTCTTCTTCTTTGCTTTGTATCTAGTAGCT
TTTGGACAGGGAGGGCACAAGCCTTGTGTACAAGCTTTTGGAGCGGACCAATTTGATGCT
CAAGACCCAGAAGAAAGTAAAGCTAAAAGCTCATTCTTCAATTGGTGGTATTTTGGAATG
TGTGGTGGTCTGTTGATGACCCTCTGGATATTGAACTACATTCAAGACAACCTTAGCTGG
GGTCTGGGATTTGGAATTCCCTGTATTGTCATGGGTCTTGCTCTTATTGTGTTCTTGCTT
GGAAGCTTCACTTATCGGTTTCGCCAGAGCAGTGATGAAAAGAACCCATTTCTTAGAATT
GGTAATGTGTTTATTAATGCAGTTAGGAATTGGCAAACAACCGCTTCAGCTATATCAGTG
GAACAAGAAGTTCAGGGTATTCTTCCTCATGAAGGTTCTGAACAATTCAAGTTCCTCAAC
AAAGCGTTGCTTGCCCCCGATGGTTCCAAGGAAAATGGGAAAATTTGTAGTATCAGCGAG
GTTGAAGAGGCTAAGGCTATTCTTAGGTTGATTCCAATATGGATAACGTGTTTGGTATAT
GCTATTGTGTTTTCACAGTCATCCACTTTATTCACCAAACAAGGTGCAACTTTGGACAGA
TCTCTTGGTTCAAATTTTGAAGTACCAGCTGCCTCATTACAATCTTTCATCAGCCTCTCT
GTTGTTGTTTTTATTCCTATATATGACCGTATTTTGGTTCCCGTTGCAAGAGCTATAACT
AGGAAACCGTCAGGTATCACTGTACTCCAAAGAATTGGAACTGGGATTTTCTTGTCTATA
CTTTCCATGGTGATTGCAGCTATAGTCGAGAAGAAACGTCTCGAAACTGCTATACAATAC
GGGCTGGTTGACATGCCAAAGGCAACAATTCCCATGAGCATTTGTTGGTTAATACCTCAG
TACCTACTATTTGGTATTTCCGATGTATTTACCATGGTTGGTCTGCAGGAGTTCTTCTAC
GATCAGGTGCCAGTCGAGTTGAAAAGTATAGGCCTTTCTCTCTACCTCAGCATATTTGGC
ATAGGGAGCTTCTTAAGCAGTTTCCTCATCTCTGTTATTGAGAACATCACTGGTAAAGAT
GGTCAGAGCAGTTGGTTTTCGGACAACTTGAATCGGGCACATCTGGATTACTTCTATTGG
GTTCTTGCTGTACTTAGTACTATGGCATTCACTGCATACTTGTATTTTTCAAGATCTTAT
ATATACAATAAGTCAAGTTCTCTCTAA

Peptide Sequence

PEP ID

XP_016462208.1
PEP Infomation

PREDICTED: protein NRT1/ PTR FAMILY 5.10-like [Nicotiana tabacum]
Sequence

MATGVNISDAETPFLGDVVEGSVDFKGRPVTRSKSGGWRSASFIIGVEVAERFAYYGISS
NLISYLTGPLGQSVATAAVNVNAWSGTASLLPLLGAFIADSYLGRYRTIIISSLLYILGL
GFLTLSTVLPLNYSDCQDTATCSPPKLQIIFFFFALYLVAFGQGGHKPCVQAFGADQFDA
QDPEESKAKSSFFNWWYFGMCGGLLMTLWILNYIQDNLSWGLGFGIPCIVMGLALIVFLL
GSFTYRFRQSSDEKNPFLRIGNVFINAVRNWQTTASAISVEQEVQGILPHEGSEQFKFLN
KALLAPDGSKENGKICSISEVEEAKAILRLIPIWITCLVYAIVFSQSSTLFTKQGATLDR
SLGSNFEVPAASLQSFISLSVVVFIPIYDRILVPVARAITRKPSGITVLQRIGTGIFLSI
LSMVIAAIVEKKRLETAIQYGLVDMPKATIPMSICWLIPQYLLFGISDVFTMVGLQEFFY
DQVPVELKSIGLSLYLSIFGIGSFLSSFLISVIENITGKDGQSSWFSDNLNRAHLDYFYW
VLAVLSTMAFTAYLYFSRSYIYNKSSSL

Transcript Sequence

Gene sequence data has not been registered.